Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.9■□□□□ 0.3
RNF144AP50876 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RNF144AP50876 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
RNF144AP50876 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.89■□□□□ 0.3
RNF144AP50876 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNF144AP50876 HOXB1-202ENST00000577092 1414 ntBASIC16.89■□□□□ 0.29
RNF144AP50876 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 AC009102.3-201ENST00000623118 1491 ntBASIC16.89■□□□□ 0.29
RNF144AP50876 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF144AP50876 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 AC005521.1-201ENST00000393351 872 ntBASIC16.89■□□□□ 0.29
RNF144AP50876 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF144AP50876 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.89■□□□□ 0.29
RNF144AP50876 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.89■□□□□ 0.29
RNF144AP50876 GCSHP2-201ENST00000560971 527 ntBASIC16.89■□□□□ 0.29
RNF144AP50876 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF144AP50876 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF144AP50876 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.89■□□□□ 0.29
RNF144AP50876 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF144AP50876 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 GMCL1P1-201ENST00000463439 1581 ntBASIC16.89■□□□□ 0.29
RNF144AP50876 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
RNF144AP50876 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RNF144AP50876 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
RNF144AP50876 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.89■□□□□ 0.29
RNF144AP50876 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RNF144AP50876 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF144AP50876 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF144AP50876 PHGDH-209ENST00000641074 1780 ntBASIC16.88■□□□□ 0.29
RNF144AP50876 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF144AP50876 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF144AP50876 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF144AP50876 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF144AP50876 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF144AP50876 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
RNF144AP50876 AC005363.2-201ENST00000618631 242 ntBASIC16.88■□□□□ 0.29
RNF144AP50876 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.88■□□□□ 0.29
RNF144AP50876 AL157888.1-201ENST00000631930 593 ntBASIC16.88■□□□□ 0.29
RNF144AP50876 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
RNF144AP50876 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.88■□□□□ 0.29
RNF144AP50876 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF144AP50876 AL162741.1-201ENST00000565563 1558 ntBASIC16.88■□□□□ 0.29
RNF144AP50876 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
RNF144AP50876 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
RNF144AP50876 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.88■□□□□ 0.29
RNF144AP50876 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
RNF144AP50876 LINC01126-201ENST00000623515 1646 ntBASIC16.88■□□□□ 0.29
RNF144AP50876 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
RNF144AP50876 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
RNF144AP50876 AL096828.2-201ENST00000567259 1965 ntBASIC16.88■□□□□ 0.29
RNF144AP50876 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF144AP50876 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
RNF144AP50876 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.87■□□□□ 0.29
RNF144AP50876 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 TERF1P1-201ENST00000311003 1181 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
RNF144AP50876 MIR149-201ENST00000384879 89 ntBASIC16.87■□□□□ 0.29
RNF144AP50876 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms