Protein–RNA interactions for Protein: P50553

ASCL1, Achaete-scute homolog 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASCL1P50553 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASCL1P50553 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ASCL1P50553 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ASCL1P50553 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.14■□□□□ 0.17
ASCL1P50553 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.14■□□□□ 0.17
ASCL1P50553 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
ASCL1P50553 KRT18P41-201ENST00000518924 1277 ntBASIC16.14■□□□□ 0.17
ASCL1P50553 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC16.14■□□□□ 0.17
ASCL1P50553 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.14■□□□□ 0.17
ASCL1P50553 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASCL1P50553 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.14■□□□□ 0.17
ASCL1P50553 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.14■□□□□ 0.17
ASCL1P50553 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ASCL1P50553 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.14■□□□□ 0.17
ASCL1P50553 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.14■□□□□ 0.17
ASCL1P50553 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.14■□□□□ 0.17
ASCL1P50553 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.14■□□□□ 0.17
ASCL1P50553 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASCL1P50553 AL357033.4-201ENST00000617703 1807 ntBASIC16.14■□□□□ 0.17
ASCL1P50553 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
ASCL1P50553 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
ASCL1P50553 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.13■□□□□ 0.17
ASCL1P50553 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC16.13■□□□□ 0.17
ASCL1P50553 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.13■□□□□ 0.17
ASCL1P50553 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
ASCL1P50553 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.13■□□□□ 0.17
ASCL1P50553 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.13■□□□□ 0.17
ASCL1P50553 RN7SL606P-201ENST00000472779 293 ntBASIC16.13■□□□□ 0.17
ASCL1P50553 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.13■□□□□ 0.17
ASCL1P50553 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.13■□□□□ 0.17
ASCL1P50553 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.13■□□□□ 0.17
ASCL1P50553 AL160237.2-201ENST00000556165 472 ntBASIC16.13■□□□□ 0.17
ASCL1P50553 BMF-207ENST00000559701 630 ntTSL 3 BASIC16.13■□□□□ 0.17
ASCL1P50553 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.13■□□□□ 0.17
ASCL1P50553 AC008687.5-201ENST00000593746 558 ntBASIC16.13■□□□□ 0.17
ASCL1P50553 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.13■□□□□ 0.17
ASCL1P50553 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.13■□□□□ 0.17
ASCL1P50553 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC16.13■□□□□ 0.17
ASCL1P50553 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.13■□□□□ 0.17
ASCL1P50553 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
ASCL1P50553 AC018470.1-201ENST00000624790 3129 ntBASIC16.12■□□□□ 0.17
ASCL1P50553 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.12■□□□□ 0.17
ASCL1P50553 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC16.12■□□□□ 0.17
ASCL1P50553 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.12■□□□□ 0.17
ASCL1P50553 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.12■□□□□ 0.17
ASCL1P50553 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.12■□□□□ 0.17
ASCL1P50553 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
ASCL1P50553 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 IGHV3-47-201ENST00000425060 335 ntBASIC16.12■□□□□ 0.17
ASCL1P50553 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.12■□□□□ 0.17
ASCL1P50553 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.12■□□□□ 0.17
ASCL1P50553 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.12■□□□□ 0.17
ASCL1P50553 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.12■□□□□ 0.17
ASCL1P50553 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.12■□□□□ 0.17
ASCL1P50553 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
ASCL1P50553 AL353801.3-201ENST00000609898 542 ntBASIC16.12■□□□□ 0.17
ASCL1P50553 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
ASCL1P50553 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
ASCL1P50553 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
ASCL1P50553 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
ASCL1P50553 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.11■□□□□ 0.17
ASCL1P50553 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ASCL1P50553 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
ASCL1P50553 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
ASCL1P50553 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
ASCL1P50553 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms