Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC15.49■□□□□ 0.07
CDKN1AP38936 REXO1L6P-202ENST00000619970 1078 ntBASIC15.49■□□□□ 0.07
CDKN1AP38936 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
CDKN1AP38936 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC15.49■□□□□ 0.07
CDKN1AP38936 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDKN1AP38936 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.49■□□□□ 0.07
CDKN1AP38936 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
CDKN1AP38936 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
CDKN1AP38936 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
CDKN1AP38936 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.48■□□□□ 0.07
CDKN1AP38936 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
CDKN1AP38936 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC15.48■□□□□ 0.07
CDKN1AP38936 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.48■□□□□ 0.07
CDKN1AP38936 AC096582.2-201ENST00000510860 516 ntBASIC15.48■□□□□ 0.07
CDKN1AP38936 AC106795.1-205ENST00000512851 1056 ntBASIC15.48■□□□□ 0.07
CDKN1AP38936 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDKN1AP38936 AF238378.1-201ENST00000526806 358 ntBASIC15.48■□□□□ 0.07
CDKN1AP38936 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN1AP38936 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 AC120114.3-201ENST00000611923 658 ntBASIC15.48■□□□□ 0.07
CDKN1AP38936 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDKN1AP38936 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDKN1AP38936 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.48■□□□□ 0.07
CDKN1AP38936 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
CDKN1AP38936 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC15.48■□□□□ 0.07
CDKN1AP38936 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
CDKN1AP38936 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
CDKN1AP38936 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDKN1AP38936 AC007613.1-201ENST00000572811 2597 ntBASIC15.47■□□□□ 0.07
CDKN1AP38936 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 AC009102.3-201ENST00000623118 1491 ntBASIC15.47■□□□□ 0.07
CDKN1AP38936 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.47■□□□□ 0.07
CDKN1AP38936 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC15.47■□□□□ 0.07
CDKN1AP38936 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
CDKN1AP38936 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 MIR149-201ENST00000384879 89 ntBASIC15.47■□□□□ 0.07
CDKN1AP38936 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC15.47■□□□□ 0.07
CDKN1AP38936 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 TSPY12P-201ENST00000421279 868 ntBASIC15.47■□□□□ 0.07
CDKN1AP38936 KRT18P41-201ENST00000518924 1277 ntBASIC15.47■□□□□ 0.07
CDKN1AP38936 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CDKN1AP38936 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC15.47■□□□□ 0.07
CDKN1AP38936 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC15.47■□□□□ 0.07
CDKN1AP38936 IGHV3OR16-7-201ENST00000604106 360 ntBASIC15.47■□□□□ 0.07
CDKN1AP38936 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CDKN1AP38936 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDKN1AP38936 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CDKN1AP38936 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDKN1AP38936 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms