Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 LIN28AP1-201ENST00000429574 405 ntBASIC17.29■□□□□ 0.36
KRT20P35900 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT20P35900 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 MIR3180-5-201ENST00000583743 153 ntBASIC17.29■□□□□ 0.36
KRT20P35900 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 LINC01023-201ENST00000606054 436 ntBASIC17.29■□□□□ 0.36
KRT20P35900 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.29■□□□□ 0.36
KRT20P35900 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 ESPNP-201ENST00000270691 2015 ntBASIC17.29■□□□□ 0.36
KRT20P35900 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
KRT20P35900 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
KRT20P35900 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.29■□□□□ 0.36
KRT20P35900 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
KRT20P35900 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT20P35900 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT20P35900 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
KRT20P35900 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 ATP5G1P1-201ENST00000448724 379 ntBASIC17.28■□□□□ 0.36
KRT20P35900 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.28■□□□□ 0.36
KRT20P35900 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
KRT20P35900 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT20P35900 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC17.28■□□□□ 0.36
KRT20P35900 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT20P35900 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
KRT20P35900 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT20P35900 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT20P35900 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.28■□□□□ 0.36
KRT20P35900 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.28■□□□□ 0.36
KRT20P35900 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
KRT20P35900 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
KRT20P35900 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT20P35900 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT20P35900 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT20P35900 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KRT20P35900 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
KRT20P35900 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT20P35900 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.27■□□□□ 0.36
KRT20P35900 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.27■□□□□ 0.36
KRT20P35900 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
KRT20P35900 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT20P35900 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.27■□□□□ 0.36
KRT20P35900 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
KRT20P35900 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
KRT20P35900 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
KRT20P35900 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.27■□□□□ 0.35
KRT20P35900 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
KRT20P35900 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
KRT20P35900 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
KRT20P35900 AC008556.1-201ENST00000610908 2040 ntBASIC17.26■□□□□ 0.35
KRT20P35900 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.26■□□□□ 0.35
KRT20P35900 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
KRT20P35900 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
KRT20P35900 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
KRT20P35900 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.26■□□□□ 0.35
KRT20P35900 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms