Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN7P35236 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PTPN7P35236 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PTPN7P35236 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PTPN7P35236 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN7P35236 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN7P35236 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.78■□□□□ 0.6
PTPN7P35236 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
PTPN7P35236 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
PTPN7P35236 AC092865.7-201ENST00000641832 219 ntBASIC18.78■□□□□ 0.6
PTPN7P35236 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN7P35236 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
PTPN7P35236 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.78■□□□□ 0.6
PTPN7P35236 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PTPN7P35236 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN7P35236 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PTPN7P35236 LINC00167-201ENST00000530583 1419 ntBASIC18.77■□□□□ 0.6
PTPN7P35236 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTPN7P35236 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN7P35236 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PTPN7P35236 ECEL1P3-201ENST00000427961 737 ntBASIC18.77■□□□□ 0.6
PTPN7P35236 PVRIG2P-201ENST00000435460 978 ntBASIC18.77■□□□□ 0.6
PTPN7P35236 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 ECEL1P2-202ENST00000465689 757 ntBASIC18.77■□□□□ 0.6
PTPN7P35236 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.77■□□□□ 0.6
PTPN7P35236 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.77■□□□□ 0.6
PTPN7P35236 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
PTPN7P35236 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PTPN7P35236 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.77■□□□□ 0.59
PTPN7P35236 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN7P35236 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN7P35236 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.77■□□□□ 0.59
PTPN7P35236 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PTPN7P35236 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PTPN7P35236 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTPN7P35236 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PTPN7P35236 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PTPN7P35236 AP000523.1-201ENST00000398242 1049 ntBASIC18.76■□□□□ 0.59
PTPN7P35236 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.76■□□□□ 0.59
PTPN7P35236 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.76■□□□□ 0.59
PTPN7P35236 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.76■□□□□ 0.59
PTPN7P35236 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.76■□□□□ 0.59
PTPN7P35236 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.76■□□□□ 0.59
PTPN7P35236 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PTPN7P35236 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.76■□□□□ 0.59
PTPN7P35236 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN7P35236 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PTPN7P35236 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN7P35236 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.75■□□□□ 0.59
PTPN7P35236 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PTPN7P35236 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms