Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.6■□□□□ 0.57
SLC6A4P31645 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A4P31645 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.6■□□□□ 0.57
SLC6A4P31645 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A4P31645 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC6A4P31645 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SLC6A4P31645 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.6■□□□□ 0.57
SLC6A4P31645 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SLC6A4P31645 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.6■□□□□ 0.57
SLC6A4P31645 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 NSUN5P1-202ENST00000421140 1535 ntBASIC18.59■□□□□ 0.57
SLC6A4P31645 NSUN5P2-203ENST00000457352 1529 ntBASIC18.59■□□□□ 0.57
SLC6A4P31645 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.59■□□□□ 0.57
SLC6A4P31645 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SLC6A4P31645 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A4P31645 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SLC6A4P31645 AL450487.1-201ENST00000426799 995 ntBASIC18.59■□□□□ 0.57
SLC6A4P31645 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC6A4P31645 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC18.59■□□□□ 0.57
SLC6A4P31645 FOSL1P1-201ENST00000511041 816 ntBASIC18.59■□□□□ 0.57
SLC6A4P31645 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.59■□□□□ 0.57
SLC6A4P31645 AC005336.2-201ENST00000593183 939 ntBASIC18.59■□□□□ 0.57
SLC6A4P31645 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC6A4P31645 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC6A4P31645 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
SLC6A4P31645 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.59■□□□□ 0.57
SLC6A4P31645 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SLC6A4P31645 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SLC6A4P31645 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC18.59■□□□□ 0.57
SLC6A4P31645 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.58■□□□□ 0.57
SLC6A4P31645 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
SLC6A4P31645 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SLC6A4P31645 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SLC6A4P31645 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.57
SLC6A4P31645 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A4P31645 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A4P31645 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SLC6A4P31645 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SLC6A4P31645 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SLC6A4P31645 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC6A4P31645 VENTXP7-201ENST00000475503 772 ntBASIC18.58■□□□□ 0.56
SLC6A4P31645 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC6A4P31645 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC6A4P31645 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.58■□□□□ 0.56
SLC6A4P31645 AC099336.1-202ENST00000602961 463 ntBASIC18.58■□□□□ 0.56
SLC6A4P31645 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A4P31645 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC6A4P31645 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A4P31645 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC6A4P31645 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SLC6A4P31645 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A4P31645 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.58■□□□□ 0.56
SLC6A4P31645 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.58■□□□□ 0.56
SLC6A4P31645 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.58■□□□□ 0.56
SLC6A4P31645 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A4P31645 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SLC6A4P31645 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC6A4P31645 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC6A4P31645 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
SLC6A4P31645 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.57■□□□□ 0.56
SLC6A4P31645 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.57■□□□□ 0.56
SLC6A4P31645 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SLC6A4P31645 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms