Protein–RNA interactions for Protein: P31277

HOXD11, Homeobox protein Hox-D11, humanhuman

Predicted RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11P31277 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 DCTN6-201ENST00000221114 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
HOXD11P31277 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 B3GALNT1-204ENST00000417187 1107 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD11P31277 AL627308.2-201ENST00000420014 432 ntBASIC19.4■□□□□ 0.7
HOXD11P31277 HNRNPA3P12-201ENST00000437410 1063 ntBASIC19.4■□□□□ 0.7
HOXD11P31277 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 AL359873.1-201ENST00000447908 764 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 TPRKBP1-201ENST00000456243 481 ntBASIC19.4■□□□□ 0.7
HOXD11P31277 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD11P31277 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 CYMP-203ENST00000474680 1263 ntBASIC19.4■□□□□ 0.7
HOXD11P31277 METTL15P1-201ENST00000481421 1045 ntBASIC19.4■□□□□ 0.7
HOXD11P31277 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.4■□□□□ 0.7
HOXD11P31277 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.4■□□□□ 0.7
HOXD11P31277 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD11P31277 NARF-IT1-201ENST00000584012 769 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD11P31277 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 AC011498.5-201ENST00000592027 486 ntBASIC19.4■□□□□ 0.7
HOXD11P31277 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC19.4■□□□□ 0.7
HOXD11P31277 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD11P31277 TRIM64C-201ENST00000617704 1353 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.4■□□□□ 0.7
HOXD11P31277 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.4■□□□□ 0.7
HOXD11P31277 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
HOXD11P31277 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
HOXD11P31277 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.39■□□□□ 0.7
HOXD11P31277 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.39■□□□□ 0.7
HOXD11P31277 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.39■□□□□ 0.7
HOXD11P31277 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
HOXD11P31277 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD11P31277 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 RPL35P3-201ENST00000403133 371 ntBASIC19.39■□□□□ 0.69
HOXD11P31277 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXD11P31277 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXD11P31277 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD11P31277 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 THAP5P1-201ENST00000439089 262 ntBASIC19.39■□□□□ 0.69
HOXD11P31277 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.39■□□□□ 0.69
HOXD11P31277 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXD11P31277 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD11P31277 FAM76A-207ENST00000530324 1027 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.39■□□□□ 0.69
HOXD11P31277 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC19.39■□□□□ 0.69
HOXD11P31277 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
HOXD11P31277 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 VPS4B-207ENST00000591519 551 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD11P31277 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
HOXD11P31277 FBXW7-212ENST00000604872 970 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 AC105129.3-201ENST00000605455 485 ntBASIC19.39■□□□□ 0.69
HOXD11P31277 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXD11P31277 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.39■□□□□ 0.69
HOXD11P31277 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
HOXD11P31277 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.39■□□□□ 0.69
HOXD11P31277 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
HOXD11P31277 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD11P31277 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXD11P31277 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
HOXD11P31277 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD11P31277 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD11P31277 AC244453.4-201ENST00000419150 388 ntBASIC19.38■□□□□ 0.69
HOXD11P31277 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXD11P31277 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD11P31277 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.38■□□□□ 0.69
HOXD11P31277 GTF2I-203ENST00000443166 979 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
HOXD11P31277 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
HOXD11P31277 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms