Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
HTR1EP28566 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
HTR1EP28566 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC17.41■□□□□ 0.38
HTR1EP28566 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 BX664615.1-201ENST00000443558 458 ntBASIC17.41■□□□□ 0.38
HTR1EP28566 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
HTR1EP28566 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.41■□□□□ 0.38
HTR1EP28566 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.41■□□□□ 0.38
HTR1EP28566 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR1EP28566 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.41■□□□□ 0.38
HTR1EP28566 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
HTR1EP28566 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
HTR1EP28566 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
HTR1EP28566 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
HTR1EP28566 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.4■□□□□ 0.38
HTR1EP28566 AC009053.2-201ENST00000563701 2365 ntBASIC17.4■□□□□ 0.38
HTR1EP28566 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
HTR1EP28566 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR1EP28566 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR1EP28566 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 TSPY14P-201ENST00000303979 915 ntBASIC17.4■□□□□ 0.38
HTR1EP28566 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 GUK1-204ENST00000366721 689 ntTSL 3 BASIC17.4■□□□□ 0.38
HTR1EP28566 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 AC022616.7-201ENST00000525383 220 ntBASIC17.4■□□□□ 0.38
HTR1EP28566 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.4■□□□□ 0.38
HTR1EP28566 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
HTR1EP28566 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.4■□□□□ 0.38
HTR1EP28566 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
HTR1EP28566 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
HTR1EP28566 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
HTR1EP28566 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.39■□□□□ 0.37
HTR1EP28566 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.39■□□□□ 0.37
HTR1EP28566 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
HTR1EP28566 AP005242.2-201ENST00000580065 1175 ntBASIC17.39■□□□□ 0.37
HTR1EP28566 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 AL445675.2-201ENST00000620291 557 ntBASIC17.39■□□□□ 0.37
HTR1EP28566 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
HTR1EP28566 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
HTR1EP28566 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
HTR1EP28566 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.38■□□□□ 0.37
HTR1EP28566 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.38■□□□□ 0.37
HTR1EP28566 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
HTR1EP28566 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms