Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 AL023284.2-201ENST00000405850 579 ntBASIC16.99■□□□□ 0.31
CHMP24386 SLC25A6P5-201ENST00000435663 894 ntBASIC16.99■□□□□ 0.31
CHMP24386 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.99■□□□□ 0.31
CHMP24386 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.99■□□□□ 0.31
CHMP24386 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.99■□□□□ 0.31
CHMP24386 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.99■□□□□ 0.31
CHMP24386 LINC01238-205ENST00000567549 1107 ntBASIC16.99■□□□□ 0.31
CHMP24386 NEK4P2-201ENST00000580004 1012 ntBASIC16.99■□□□□ 0.31
CHMP24386 MIR4674-201ENST00000582457 87 ntBASIC16.99■□□□□ 0.31
CHMP24386 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.99■□□□□ 0.31
CHMP24386 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
CHMP24386 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHMP24386 AC139713.2-201ENST00000641328 2723 ntBASIC16.99■□□□□ 0.31
CHMP24386 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
CHMP24386 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
CHMP24386 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 GPAT2P1-201ENST00000444924 1672 ntBASIC16.98■□□□□ 0.31
CHMP24386 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.98■□□□□ 0.31
CHMP24386 MCCD1P1-208ENST00000445732 328 ntBASIC16.98■□□□□ 0.31
CHMP24386 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 COX11P1-201ENST00000489116 835 ntBASIC16.98■□□□□ 0.31
CHMP24386 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.98■□□□□ 0.31
CHMP24386 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.98■□□□□ 0.31
CHMP24386 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.98■□□□□ 0.31
CHMP24386 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CHMP24386 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
CHMP24386 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.98■□□□□ 0.31
CHMP24386 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
CHMP24386 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP24386 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP24386 AC104076.2-201ENST00000448912 469 ntBASIC16.97■□□□□ 0.31
CHMP24386 DUX4L26-201ENST00000489078 1255 ntBASIC16.97■□□□□ 0.31
CHMP24386 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP24386 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP24386 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.97■□□□□ 0.31
CHMP24386 CR769767.2-201ENST00000622735 460 ntBASIC16.97■□□□□ 0.31
CHMP24386 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.97■□□□□ 0.31
CHMP24386 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.97■□□□□ 0.31
CHMP24386 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CHMP24386 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms