Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CAPN3P20807 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CAPN3P20807 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 MCCD1P1-208ENST00000445732 328 ntBASIC17.5■□□□□ 0.39
CAPN3P20807 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 AF186192.3-201ENST00000583427 947 ntBASIC17.5■□□□□ 0.39
CAPN3P20807 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CAPN3P20807 SDHAP2-201ENST00000455183 2001 ntBASIC17.5■□□□□ 0.39
CAPN3P20807 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
CAPN3P20807 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CAPN3P20807 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.5■□□□□ 0.39
CAPN3P20807 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CAPN3P20807 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN3P20807 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
CAPN3P20807 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN3P20807 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
CAPN3P20807 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 MESTP1-201ENST00000404287 994 ntBASIC17.49■□□□□ 0.39
CAPN3P20807 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPN3P20807 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPN3P20807 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPN3P20807 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPN3P20807 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.49■□□□□ 0.39
CAPN3P20807 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.49■□□□□ 0.39
CAPN3P20807 AC090340.1-201ENST00000620778 4980 ntBASIC17.49■□□□□ 0.39
CAPN3P20807 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
CAPN3P20807 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
CAPN3P20807 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.49■□□□□ 0.39
CAPN3P20807 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CAPN3P20807 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN3P20807 KRT18P22-201ENST00000402024 1347 ntBASIC17.48■□□□□ 0.39
CAPN3P20807 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 AC141586.5-201ENST00000624546 2050 ntBASIC17.48■□□□□ 0.39
CAPN3P20807 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN3P20807 UNC93B2-201ENST00000285383 730 ntBASIC17.48■□□□□ 0.39
CAPN3P20807 AL137013.1-201ENST00000432946 1228 ntBASIC17.48■□□□□ 0.39
CAPN3P20807 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.48■□□□□ 0.39
CAPN3P20807 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN3P20807 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.48■□□□□ 0.39
CAPN3P20807 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPN3P20807 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.48■□□□□ 0.39
CAPN3P20807 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.48■□□□□ 0.39
CAPN3P20807 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CAPN3P20807 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CAPN3P20807 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.48■□□□□ 0.39
CAPN3P20807 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN3P20807 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN3P20807 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CAPN3P20807 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN3P20807 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.47■□□□□ 0.39
CAPN3P20807 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.47■□□□□ 0.39
CAPN3P20807 AP000692.2-201ENST00000608391 879 ntBASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms