Protein–RNA interactions for Protein: P19474

TRIM21, E3 ubiquitin-protein ligase TRIM21, humanhuman

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM21P19474 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM21P19474 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 GNAS-203ENST00000306120 1878 ntBASIC20.05■□□□□ 0.8
TRIM21P19474 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRIM21P19474 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
TRIM21P19474 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM21P19474 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM21P19474 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 AL137013.1-201ENST00000432946 1228 ntBASIC20.05■□□□□ 0.8
TRIM21P19474 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM21P19474 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM21P19474 SLC25A3P1-201ENST00000443844 931 ntBASIC20.05■□□□□ 0.8
TRIM21P19474 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM21P19474 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TRIM21P19474 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM21P19474 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
TRIM21P19474 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM21P19474 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM21P19474 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM21P19474 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM21P19474 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRIM21P19474 AC099343.3-201ENST00000605834 2503 ntBASIC20.04■□□□□ 0.8
TRIM21P19474 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
TRIM21P19474 AC113347.1-201ENST00000413321 391 ntBASIC20.04■□□□□ 0.8
TRIM21P19474 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.04■□□□□ 0.8
TRIM21P19474 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM21P19474 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
TRIM21P19474 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM21P19474 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM21P19474 GMCL1P1-201ENST00000463439 1581 ntBASIC20.04■□□□□ 0.8
TRIM21P19474 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM21P19474 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM21P19474 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC20.03■□□□□ 0.8
TRIM21P19474 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM21P19474 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM21P19474 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC20.03■□□□□ 0.8
TRIM21P19474 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
TRIM21P19474 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
TRIM21P19474 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM21P19474 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM21P19474 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM21P19474 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TRIM21P19474 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM21P19474 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
TRIM21P19474 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM21P19474 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM21P19474 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM21P19474 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM21P19474 SLC25A6P5-201ENST00000435663 894 ntBASIC20.02■□□□□ 0.8
TRIM21P19474 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM21P19474 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM21P19474 DUT-205ENST00000558813 769 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM21P19474 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM21P19474 FAM87A-204ENST00000613235 858 ntBASIC20.02■□□□□ 0.8
TRIM21P19474 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM21P19474 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TRIM21P19474 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM21P19474 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM21P19474 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms