Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.61■■□□□ 1.05
NCLP19338 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC21.61■■□□□ 1.05
NCLP19338 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.61■■□□□ 1.05
NCLP19338 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
NCLP19338 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.61■■□□□ 1.05
NCLP19338 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 AC009053.2-201ENST00000563701 2365 ntBASIC21.61■■□□□ 1.05
NCLP19338 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC21.61■■□□□ 1.05
NCLP19338 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NCLP19338 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
NCLP19338 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC21.6■■□□□ 1.05
NCLP19338 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC21.6■■□□□ 1.05
NCLP19338 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NCLP19338 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NCLP19338 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.6■■□□□ 1.05
NCLP19338 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC21.6■■□□□ 1.05
NCLP19338 DHDH-203ENST00000522614 776 ntTSL 5 BASIC21.6■■□□□ 1.05
NCLP19338 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC21.6■■□□□ 1.05
NCLP19338 MIR4785-201ENST00000585005 73 ntBASIC21.6■■□□□ 1.05
NCLP19338 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC21.6■■□□□ 1.05
NCLP19338 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC21.6■■□□□ 1.05
NCLP19338 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
NCLP19338 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NCLP19338 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
NCLP19338 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.6■■□□□ 1.05
NCLP19338 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
NCLP19338 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC21.59■■□□□ 1.05
NCLP19338 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NCLP19338 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
NCLP19338 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC21.59■■□□□ 1.05
NCLP19338 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.59■■□□□ 1.05
NCLP19338 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC21.59■■□□□ 1.05
NCLP19338 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.59■■□□□ 1.05
NCLP19338 AF186192.3-201ENST00000583427 947 ntBASIC21.59■■□□□ 1.05
NCLP19338 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NCLP19338 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC21.59■■□□□ 1.05
NCLP19338 AC073912.3-201ENST00000624414 853 ntBASIC21.59■■□□□ 1.05
NCLP19338 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC21.59■■□□□ 1.05
NCLP19338 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC21.59■■□□□ 1.05
NCLP19338 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC21.59■■□□□ 1.05
NCLP19338 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
NCLP19338 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.59■■□□□ 1.05
NCLP19338 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NCLP19338 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.58■■□□□ 1.05
NCLP19338 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
NCLP19338 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
NCLP19338 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
NCLP19338 SAPCD2P4-201ENST00000424595 1171 ntBASIC21.58■■□□□ 1.05
NCLP19338 AL353807.1-201ENST00000427475 662 ntBASIC21.58■■□□□ 1.05
NCLP19338 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC21.58■■□□□ 1.05
NCLP19338 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC21.58■■□□□ 1.05
NCLP19338 PENK-204ENST00000518770 863 ntTSL 2 BASIC21.58■■□□□ 1.05
NCLP19338 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.58■■□□□ 1.05
NCLP19338 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC21.58■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms