Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC18.27■□□□□ 0.52
VCLP18206 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
VCLP18206 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.27■□□□□ 0.52
VCLP18206 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.27■□□□□ 0.52
VCLP18206 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.27■□□□□ 0.52
VCLP18206 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 AC126763.1-201ENST00000552015 2118 ntBASIC18.27■□□□□ 0.52
VCLP18206 AC009065.1-201ENST00000564055 1225 ntBASIC18.27■□□□□ 0.52
VCLP18206 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 AC073592.3-201ENST00000625118 1834 ntBASIC18.27■□□□□ 0.52
VCLP18206 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.27■□□□□ 0.52
VCLP18206 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VCLP18206 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
VCLP18206 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VCLP18206 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.51
VCLP18206 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VCLP18206 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
VCLP18206 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
VCLP18206 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.27■□□□□ 0.51
VCLP18206 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
VCLP18206 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.26■□□□□ 0.51
VCLP18206 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
VCLP18206 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 AC112777.1-201ENST00000540175 1423 ntBASIC18.26■□□□□ 0.51
VCLP18206 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.26■□□□□ 0.51
VCLP18206 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC18.26■□□□□ 0.51
VCLP18206 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.26■□□□□ 0.51
VCLP18206 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC18.26■□□□□ 0.51
VCLP18206 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
VCLP18206 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
VCLP18206 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.26■□□□□ 0.51
VCLP18206 AL499627.1-201ENST00000569373 2188 ntBASIC18.25■□□□□ 0.51
VCLP18206 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 AP000593.1-201ENST00000393668 712 ntBASIC18.25■□□□□ 0.51
VCLP18206 STARP1-201ENST00000397973 869 ntBASIC18.25■□□□□ 0.51
VCLP18206 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.25■□□□□ 0.51
VCLP18206 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 AC087388.1-201ENST00000571370 1112 ntBASIC18.25■□□□□ 0.51
VCLP18206 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 NTF6B-201ENST00000591913 560 ntBASIC18.25■□□□□ 0.51
VCLP18206 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
VCLP18206 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.25■□□□□ 0.51
VCLP18206 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
VCLP18206 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
VCLP18206 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
VCLP18206 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VCLP18206 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
VCLP18206 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
VCLP18206 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCLP18206 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCLP18206 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
VCLP18206 ARMC10P1-201ENST00000313754 855 ntBASIC18.24■□□□□ 0.51
VCLP18206 SAPCD2P2-201ENST00000431719 1174 ntBASIC18.24■□□□□ 0.51
VCLP18206 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
VCLP18206 AL359075.1-203ENST00000462729 1002 ntBASIC18.24■□□□□ 0.51
VCLP18206 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms