Protein–RNA interactions for Protein: P0C7X3

CCNYL3, Putative cyclin-Y-like protein 3, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL3P0C7X3 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.54■□□□□ 0.4
CCNYL3P0C7X3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 OR6D1P-202ENST00000641007 5290 ntBASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 AC009065.1-201ENST00000564055 1225 ntBASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 MIR3180-4-201ENST00000582223 153 ntBASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CCNYL3P0C7X3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCNYL3P0C7X3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.52■□□□□ 0.39
CCNYL3P0C7X3 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 WIZP1-201ENST00000531444 2299 ntBASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCNYL3P0C7X3 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms