Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC006333.2-201ENST00000607957 2099 ntBASIC16.97■□□□□ 0.31
PDGFAP04085 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
PDGFAP04085 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
PDGFAP04085 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
PDGFAP04085 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 NUS1P2-201ENST00000417358 873 ntBASIC16.97■□□□□ 0.31
PDGFAP04085 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.97■□□□□ 0.31
PDGFAP04085 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.97■□□□□ 0.31
PDGFAP04085 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC16.97■□□□□ 0.31
PDGFAP04085 REXO1L6P-202ENST00000619970 1078 ntBASIC16.97■□□□□ 0.31
PDGFAP04085 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
PDGFAP04085 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.97■□□□□ 0.31
PDGFAP04085 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
PDGFAP04085 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
PDGFAP04085 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
PDGFAP04085 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.96■□□□□ 0.31
PDGFAP04085 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 SAPCD2P3-201ENST00000455031 850 ntBASIC16.96■□□□□ 0.31
PDGFAP04085 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.96■□□□□ 0.31
PDGFAP04085 RNA5SP419-201ENST00000515908 135 ntBASIC16.96■□□□□ 0.31
PDGFAP04085 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.96■□□□□ 0.31
PDGFAP04085 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC16.96■□□□□ 0.31
PDGFAP04085 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.96■□□□□ 0.31
PDGFAP04085 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.96■□□□□ 0.31
PDGFAP04085 AF228730.7-201ENST00000641842 219 ntBASIC16.96■□□□□ 0.31
PDGFAP04085 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.96■□□□□ 0.31
PDGFAP04085 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
PDGFAP04085 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
PDGFAP04085 AC005332.7-201ENST00000614046 2005 ntBASIC16.96■□□□□ 0.3
PDGFAP04085 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDGFAP04085 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDGFAP04085 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
PDGFAP04085 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.96■□□□□ 0.3
PDGFAP04085 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
PDGFAP04085 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFAP04085 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PDGFAP04085 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 KRT8P32-201ENST00000512863 1461 ntBASIC16.95■□□□□ 0.3
PDGFAP04085 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PDGFAP04085 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFAP04085 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PDGFAP04085 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFAP04085 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.95■□□□□ 0.3
PDGFAP04085 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PDGFAP04085 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.95■□□□□ 0.3
PDGFAP04085 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC16.95■□□□□ 0.3
PDGFAP04085 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.95■□□□□ 0.3
PDGFAP04085 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PDGFAP04085 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.95■□□□□ 0.3
PDGFAP04085 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.95■□□□□ 0.3
PDGFAP04085 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PDGFAP04085 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.94■□□□□ 0.3
PDGFAP04085 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PDGFAP04085 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
PDGFAP04085 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms