Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
LTAP01374 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.69□□□□□ -0.22
LTAP01374 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
LTAP01374 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LTAP01374 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 MIR149-201ENST00000384879 89 ntBASIC13.69□□□□□ -0.22
LTAP01374 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.69□□□□□ -0.22
LTAP01374 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC13.69□□□□□ -0.22
LTAP01374 MTDHP1-201ENST00000605323 784 ntBASIC13.69□□□□□ -0.22
LTAP01374 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC13.69□□□□□ -0.22
LTAP01374 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LTAP01374 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC13.69□□□□□ -0.22
LTAP01374 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
LTAP01374 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC13.69□□□□□ -0.22
LTAP01374 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LTAP01374 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC13.68□□□□□ -0.22
LTAP01374 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LTAP01374 CROCCP2-202ENST00000412962 2773 ntBASIC13.68□□□□□ -0.22
LTAP01374 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 UROS-202ENST00000368778 1556 ntTSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LTAP01374 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LTAP01374 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 NIFKP9-201ENST00000419265 221 ntBASIC13.68□□□□□ -0.22
LTAP01374 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC13.68□□□□□ -0.22
LTAP01374 NCF1B-203ENST00000435988 1254 ntBASIC13.68□□□□□ -0.22
LTAP01374 MCCD1P1-208ENST00000445732 328 ntBASIC13.68□□□□□ -0.22
LTAP01374 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC13.68□□□□□ -0.22
LTAP01374 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 WT1-AS_3.1-201ENST00000613262 234 ntBASIC13.68□□□□□ -0.22
LTAP01374 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.68□□□□□ -0.22
LTAP01374 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 AL163051.1-201ENST00000569214 1512 ntBASIC13.68□□□□□ -0.22
LTAP01374 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.68□□□□□ -0.22
LTAP01374 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LTAP01374 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
LTAP01374 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LTAP01374 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.68□□□□□ -0.22
LTAP01374 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LTAP01374 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.67□□□□□ -0.22
LTAP01374 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LTAP01374 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.67□□□□□ -0.22
LTAP01374 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
LTAP01374 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC13.67□□□□□ -0.22
LTAP01374 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LTAP01374 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61 ms