Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ZBED1O96006 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.2■□□□□ 0.66
ZBED1O96006 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC19.2■□□□□ 0.66
ZBED1O96006 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ZBED1O96006 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.19■□□□□ 0.66
ZBED1O96006 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.19■□□□□ 0.66
ZBED1O96006 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ZBED1O96006 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.19■□□□□ 0.66
ZBED1O96006 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ZBED1O96006 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.19■□□□□ 0.66
ZBED1O96006 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.19■□□□□ 0.66
ZBED1O96006 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.19■□□□□ 0.66
ZBED1O96006 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.19■□□□□ 0.66
ZBED1O96006 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.19■□□□□ 0.66
ZBED1O96006 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.19■□□□□ 0.66
ZBED1O96006 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
ZBED1O96006 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.18■□□□□ 0.66
ZBED1O96006 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.18■□□□□ 0.66
ZBED1O96006 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZBED1O96006 KRT89P-201ENST00000620027 1478 ntBASIC19.18■□□□□ 0.66
ZBED1O96006 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 AP003733.1-201ENST00000491725 852 ntBASIC19.18■□□□□ 0.66
ZBED1O96006 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.18■□□□□ 0.66
ZBED1O96006 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
ZBED1O96006 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 GMCL1P1-201ENST00000463439 1581 ntBASIC19.18■□□□□ 0.66
ZBED1O96006 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ZBED1O96006 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.18■□□□□ 0.66
ZBED1O96006 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
ZBED1O96006 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
ZBED1O96006 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZBED1O96006 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
ZBED1O96006 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZBED1O96006 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZBED1O96006 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZBED1O96006 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
ZBED1O96006 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
ZBED1O96006 COPS8-203ENST00000409334 794 ntTSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZBED1O96006 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
ZBED1O96006 CNP-204ENST00000472031 1019 ntTSL 2 BASIC19.17■□□□□ 0.66
ZBED1O96006 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.17■□□□□ 0.66
ZBED1O96006 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
ZBED1O96006 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.17■□□□□ 0.66
ZBED1O96006 AC011498.5-201ENST00000592027 486 ntBASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms