Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.21■□□□□ 0.19
CLDN1O95832 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.21■□□□□ 0.19
CLDN1O95832 MIR3687-2-201ENST00000577708 61 ntBASIC16.21■□□□□ 0.19
CLDN1O95832 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.21■□□□□ 0.19
CLDN1O95832 MIR3687-1-201ENST00000614492 61 ntBASIC16.21■□□□□ 0.19
CLDN1O95832 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CLDN1O95832 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CLDN1O95832 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CLDN1O95832 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN1O95832 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.21■□□□□ 0.18
CLDN1O95832 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
CLDN1O95832 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN1O95832 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CLDN1O95832 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 KRT8P3-201ENST00000519669 1449 ntBASIC16.2■□□□□ 0.18
CLDN1O95832 KRT8P7-201ENST00000533003 1432 ntBASIC16.2■□□□□ 0.18
CLDN1O95832 GOLGA6L5P-202ENST00000515341 1828 ntBASIC16.2■□□□□ 0.18
CLDN1O95832 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
CLDN1O95832 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN1O95832 AC096582.2-201ENST00000510860 516 ntBASIC16.2■□□□□ 0.18
CLDN1O95832 IGHV3-22-201ENST00000520721 359 ntBASIC16.2■□□□□ 0.18
CLDN1O95832 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.2■□□□□ 0.18
CLDN1O95832 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CLDN1O95832 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.2■□□□□ 0.18
CLDN1O95832 AC134684.3-201ENST00000641758 218 ntBASIC16.2■□□□□ 0.18
CLDN1O95832 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
CLDN1O95832 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CLDN1O95832 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN1O95832 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLDN1O95832 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLDN1O95832 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN1O95832 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN1O95832 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CLDN1O95832 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 AL353692.3-201ENST00000407031 1396 ntBASIC16.19■□□□□ 0.18
CLDN1O95832 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CLDN1O95832 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN1O95832 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 RPS2P28-201ENST00000314255 741 ntBASIC16.19■□□□□ 0.18
CLDN1O95832 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CLDN1O95832 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN1O95832 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN1O95832 FGFR3P6-201ENST00000457012 610 ntBASIC16.19■□□□□ 0.18
CLDN1O95832 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN1O95832 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN1O95832 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.19■□□□□ 0.18
CLDN1O95832 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.19■□□□□ 0.18
CLDN1O95832 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN1O95832 AC114341.1-201ENST00000618070 349 ntBASIC16.19■□□□□ 0.18
CLDN1O95832 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.19■□□□□ 0.18
CLDN1O95832 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 TNXA-203ENST00000507684 2038 ntBASIC16.19■□□□□ 0.18
CLDN1O95832 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.19■□□□□ 0.18
CLDN1O95832 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CLDN1O95832 HOXB1-202ENST00000577092 1414 ntBASIC16.19■□□□□ 0.18
CLDN1O95832 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN1O95832 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.18■□□□□ 0.18
CLDN1O95832 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
CLDN1O95832 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CLDN1O95832 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms