Protein–RNA interactions for Protein: O95206

PCDH8, Protocadherin-8, humanhuman

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8O95206 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.12■□□□□ 0.49
PCDH8O95206 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH8O95206 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDH8O95206 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH8O95206 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH8O95206 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH8O95206 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC18.12■□□□□ 0.49
PCDH8O95206 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
PCDH8O95206 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.12■□□□□ 0.49
PCDH8O95206 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.12■□□□□ 0.49
PCDH8O95206 AP005901.3-202ENST00000581653 237 ntBASIC18.12■□□□□ 0.49
PCDH8O95206 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
PCDH8O95206 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
PCDH8O95206 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
PCDH8O95206 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
PCDH8O95206 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
PCDH8O95206 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 AP000974.1-201ENST00000623909 2387 ntBASIC18.11■□□□□ 0.49
PCDH8O95206 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
PCDH8O95206 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
PCDH8O95206 NUS1P2-201ENST00000417358 873 ntBASIC18.11■□□□□ 0.49
PCDH8O95206 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.11■□□□□ 0.49
PCDH8O95206 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH8O95206 GMCL1P1-201ENST00000463439 1581 ntBASIC18.11■□□□□ 0.49
PCDH8O95206 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.11■□□□□ 0.49
PCDH8O95206 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.11■□□□□ 0.49
PCDH8O95206 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
PCDH8O95206 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH8O95206 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDH8O95206 EMBP1-201ENST00000458200 901 ntBASIC18.1■□□□□ 0.49
PCDH8O95206 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDH8O95206 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.1■□□□□ 0.49
PCDH8O95206 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.1■□□□□ 0.49
PCDH8O95206 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
PCDH8O95206 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH8O95206 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.1■□□□□ 0.49
PCDH8O95206 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDH8O95206 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDH8O95206 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH8O95206 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
PCDH8O95206 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDH8O95206 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDH8O95206 FAAHP1-202ENST00000446499 1238 ntBASIC18.09■□□□□ 0.49
PCDH8O95206 AC068472.1-201ENST00000474589 881 ntBASIC18.09■□□□□ 0.49
PCDH8O95206 BET1L-206ENST00000486280 665 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH8O95206 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDH8O95206 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
PCDH8O95206 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDH8O95206 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDH8O95206 CROCCP3-202ENST00000420820 1947 ntBASIC18.09■□□□□ 0.49
PCDH8O95206 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
PCDH8O95206 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms