Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TRIM13O60858 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.9■□□□□ 0.46
TRIM13O60858 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRIM13O60858 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRIM13O60858 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM13O60858 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.89■□□□□ 0.46
TRIM13O60858 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRIM13O60858 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM13O60858 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM13O60858 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM13O60858 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM13O60858 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM13O60858 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM13O60858 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.89■□□□□ 0.45
TRIM13O60858 FAM197Y4-202ENST00000622692 608 ntBASIC17.89■□□□□ 0.45
TRIM13O60858 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 LINC01126-201ENST00000623515 1646 ntBASIC17.89■□□□□ 0.45
TRIM13O60858 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 AC141586.5-201ENST00000624546 2050 ntBASIC17.89■□□□□ 0.45
TRIM13O60858 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.89■□□□□ 0.45
TRIM13O60858 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM13O60858 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM13O60858 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
TRIM13O60858 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM13O60858 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM13O60858 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 KRT18P23-201ENST00000435622 1283 ntBASIC17.88■□□□□ 0.45
TRIM13O60858 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.88■□□□□ 0.45
TRIM13O60858 NUDT16P1-203ENST00000513809 620 ntBASIC17.88■□□□□ 0.45
TRIM13O60858 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM13O60858 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM13O60858 AL359736.2-201ENST00000621992 437 ntBASIC17.88■□□□□ 0.45
TRIM13O60858 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM13O60858 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM13O60858 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM13O60858 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
TRIM13O60858 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM13O60858 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM13O60858 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM13O60858 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM13O60858 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM13O60858 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TRIM13O60858 SPIB-206ENST00000596074 847 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRIM13O60858 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM13O60858 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM13O60858 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM13O60858 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM13O60858 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.86■□□□□ 0.45
TRIM13O60858 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM13O60858 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms