Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZIC3O60481 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.31■□□□□ 0.2
ZIC3O60481 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ZIC3O60481 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 AC091607.1-201ENST00000490318 1060 ntBASIC16.31■□□□□ 0.2
ZIC3O60481 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.31■□□□□ 0.2
ZIC3O60481 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.31■□□□□ 0.2
ZIC3O60481 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZIC3O60481 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.31■□□□□ 0.2
ZIC3O60481 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
ZIC3O60481 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZIC3O60481 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.31■□□□□ 0.2
ZIC3O60481 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC3O60481 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ZIC3O60481 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC3O60481 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC3O60481 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 BICD1-207ENST00000551848 1962 ntBASIC16.3■□□□□ 0.2
ZIC3O60481 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 DUTP2-201ENST00000519164 463 ntBASIC16.3■□□□□ 0.2
ZIC3O60481 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.3■□□□□ 0.2
ZIC3O60481 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC3O60481 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.3■□□□□ 0.2
ZIC3O60481 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZIC3O60481 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.3■□□□□ 0.2
ZIC3O60481 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZIC3O60481 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC3O60481 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
ZIC3O60481 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZIC3O60481 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.3■□□□□ 0.2
ZIC3O60481 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.3■□□□□ 0.2
ZIC3O60481 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZIC3O60481 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
ZIC3O60481 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.29■□□□□ 0.2
ZIC3O60481 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.29■□□□□ 0.2
ZIC3O60481 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZIC3O60481 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.29■□□□□ 0.2
ZIC3O60481 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
ZIC3O60481 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.29■□□□□ 0.2
ZIC3O60481 AC246785.2-201ENST00000432512 513 ntBASIC16.29■□□□□ 0.2
ZIC3O60481 AP000867.3-201ENST00000524675 377 ntBASIC16.29■□□□□ 0.2
ZIC3O60481 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.29■□□□□ 0.2
ZIC3O60481 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.29■□□□□ 0.2
ZIC3O60481 MIR3652-201ENST00000579335 131 ntBASIC16.29■□□□□ 0.2
ZIC3O60481 AP005901.3-202ENST00000581653 237 ntBASIC16.29■□□□□ 0.2
ZIC3O60481 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ZIC3O60481 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.29■□□□□ 0.2
ZIC3O60481 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZIC3O60481 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms