Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.36■□□□□ 0.37
DUX1O43812 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.36■□□□□ 0.37
DUX1O43812 AL022342.1-201ENST00000400363 863 ntBASIC17.36■□□□□ 0.37
DUX1O43812 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.36■□□□□ 0.37
DUX1O43812 AF238378.1-201ENST00000526806 358 ntBASIC17.36■□□□□ 0.37
DUX1O43812 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.36■□□□□ 0.37
DUX1O43812 SLC25A6P4-201ENST00000586535 553 ntBASIC17.36■□□□□ 0.37
DUX1O43812 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DUX1O43812 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.36■□□□□ 0.37
DUX1O43812 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
DUX1O43812 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.36■□□□□ 0.37
DUX1O43812 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.36■□□□□ 0.37
DUX1O43812 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.36■□□□□ 0.37
DUX1O43812 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC17.36■□□□□ 0.37
DUX1O43812 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC17.36■□□□□ 0.37
DUX1O43812 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.36■□□□□ 0.37
DUX1O43812 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DUX1O43812 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.36■□□□□ 0.37
DUX1O43812 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
DUX1O43812 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DUX1O43812 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
DUX1O43812 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.35■□□□□ 0.37
DUX1O43812 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
DUX1O43812 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DUX1O43812 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 RCN1P2-201ENST00000398357 915 ntBASIC17.35■□□□□ 0.37
DUX1O43812 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.35■□□□□ 0.37
DUX1O43812 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.35■□□□□ 0.37
DUX1O43812 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC17.35■□□□□ 0.37
DUX1O43812 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.35■□□□□ 0.37
DUX1O43812 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.35■□□□□ 0.37
DUX1O43812 AL138831.2-201ENST00000606564 490 ntBASIC17.35■□□□□ 0.37
DUX1O43812 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.35■□□□□ 0.37
DUX1O43812 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.35■□□□□ 0.37
DUX1O43812 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
DUX1O43812 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DUX1O43812 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.35■□□□□ 0.37
DUX1O43812 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DUX1O43812 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.34■□□□□ 0.37
DUX1O43812 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DUX1O43812 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 AC112698.1-201ENST00000510299 916 ntBASIC17.34■□□□□ 0.37
DUX1O43812 AC079776.4-201ENST00000511039 504 ntBASIC17.34■□□□□ 0.37
DUX1O43812 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
DUX1O43812 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
DUX1O43812 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX1O43812 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX1O43812 AC126763.1-201ENST00000552015 2118 ntBASIC17.33■□□□□ 0.37
DUX1O43812 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX1O43812 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
DUX1O43812 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
DUX1O43812 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
DUX1O43812 AC125634.1-201ENST00000438758 1403 ntBASIC17.33■□□□□ 0.36
DUX1O43812 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.33■□□□□ 0.36
DUX1O43812 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DUX1O43812 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
DUX1O43812 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
DUX1O43812 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.33■□□□□ 0.36
DUX1O43812 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DUX1O43812 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
DUX1O43812 AC132008.2-207ENST00000454517 770 ntBASIC17.33■□□□□ 0.36
DUX1O43812 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.33■□□□□ 0.36
DUX1O43812 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.33■□□□□ 0.36
DUX1O43812 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
DUX1O43812 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.33■□□□□ 0.36
DUX1O43812 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.33■□□□□ 0.36
DUX1O43812 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC17.33■□□□□ 0.36
DUX1O43812 AC008608.2-201ENST00000606089 416 ntBASIC17.33■□□□□ 0.36
DUX1O43812 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms