Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 AC092647.4-201ENST00000457211 535 ntBASIC16.19■□□□□ 0.18
TRAF3IP2O43734 DUX4L26-201ENST00000489078 1255 ntBASIC16.19■□□□□ 0.18
TRAF3IP2O43734 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 AC022616.7-201ENST00000525383 220 ntBASIC16.19■□□□□ 0.18
TRAF3IP2O43734 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 FLJ13224-201ENST00000313737 1514 ntBASIC16.19■□□□□ 0.18
TRAF3IP2O43734 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
TRAF3IP2O43734 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 FAM8A6P-201ENST00000407496 1135 ntBASIC16.18■□□□□ 0.18
TRAF3IP2O43734 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 HYMAI.1-201ENST00000620949 238 ntBASIC16.18■□□□□ 0.18
TRAF3IP2O43734 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.18■□□□□ 0.18
TRAF3IP2O43734 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 KRT89P-201ENST00000620027 1478 ntBASIC16.17■□□□□ 0.18
TRAF3IP2O43734 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 HBZP1-201ENST00000354915 429 ntBASIC16.17■□□□□ 0.18
TRAF3IP2O43734 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 KRT18P21-201ENST00000515767 1272 ntBASIC16.17■□□□□ 0.18
TRAF3IP2O43734 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 AC024563.2-201ENST00000603282 481 ntBASIC16.17■□□□□ 0.18
TRAF3IP2O43734 FGF14-AS2-201ENST00000606448 1074 ntBASIC16.17■□□□□ 0.18
TRAF3IP2O43734 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 LINC00167-201ENST00000530583 1419 ntBASIC16.17■□□□□ 0.18
TRAF3IP2O43734 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 AC132938.6-201ENST00000623828 1655 ntBASIC16.17■□□□□ 0.18
TRAF3IP2O43734 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
TRAF3IP2O43734 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
TRAF3IP2O43734 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms