Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.8■□□□□ 0.12
XRCC2O43543 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
XRCC2O43543 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC15.8■□□□□ 0.12
XRCC2O43543 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
XRCC2O43543 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
XRCC2O43543 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
XRCC2O43543 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
XRCC2O43543 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.79■□□□□ 0.12
XRCC2O43543 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
XRCC2O43543 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 LIN28AP1-201ENST00000429574 405 ntBASIC15.79■□□□□ 0.12
XRCC2O43543 SLC25A6P5-201ENST00000435663 894 ntBASIC15.79■□□□□ 0.12
XRCC2O43543 SLC25A3P1-201ENST00000443844 931 ntBASIC15.79■□□□□ 0.12
XRCC2O43543 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC15.79■□□□□ 0.12
XRCC2O43543 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.79■□□□□ 0.12
XRCC2O43543 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.79■□□□□ 0.12
XRCC2O43543 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.79■□□□□ 0.12
XRCC2O43543 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.79■□□□□ 0.12
XRCC2O43543 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC15.79■□□□□ 0.12
XRCC2O43543 MIR3917-201ENST00000580971 93 ntBASIC15.79■□□□□ 0.12
XRCC2O43543 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC15.79■□□□□ 0.12
XRCC2O43543 AC141257.4-201ENST00000634557 245 ntBASIC15.79■□□□□ 0.12
XRCC2O43543 AC136944.6-201ENST00000634818 245 ntBASIC15.79■□□□□ 0.12
XRCC2O43543 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
XRCC2O43543 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.79■□□□□ 0.12
XRCC2O43543 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 AC068880.1-201ENST00000507289 2297 ntBASIC15.79■□□□□ 0.12
XRCC2O43543 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
XRCC2O43543 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
XRCC2O43543 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC15.78■□□□□ 0.12
XRCC2O43543 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC15.78■□□□□ 0.12
XRCC2O43543 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
XRCC2O43543 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC15.78■□□□□ 0.12
XRCC2O43543 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.78■□□□□ 0.12
XRCC2O43543 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.78■□□□□ 0.12
XRCC2O43543 AC034232.1-201ENST00000506026 1064 ntBASIC15.78■□□□□ 0.12
XRCC2O43543 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC15.78■□□□□ 0.12
XRCC2O43543 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms