Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2A1O14983 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC20.74■□□□□ 0.91
ATP2A1O14983 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP2A1O14983 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
ATP2A1O14983 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.74■□□□□ 0.91
ATP2A1O14983 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
ATP2A1O14983 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.74■□□□□ 0.91
ATP2A1O14983 AC008608.2-201ENST00000606089 416 ntBASIC20.74■□□□□ 0.91
ATP2A1O14983 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 AL773604.1-201ENST00000617417 272 ntBASIC20.74■□□□□ 0.91
ATP2A1O14983 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.74■□□□□ 0.91
ATP2A1O14983 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP2A1O14983 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2A1O14983 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2A1O14983 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
ATP2A1O14983 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
ATP2A1O14983 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
ATP2A1O14983 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 TEX30-205ENST00000376029 959 ntTSL 2 BASIC20.73■□□□□ 0.91
ATP2A1O14983 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
ATP2A1O14983 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
ATP2A1O14983 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
ATP2A1O14983 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
ATP2A1O14983 AP001005.1-201ENST00000571755 1248 ntBASIC20.73■□□□□ 0.91
ATP2A1O14983 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP2A1O14983 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP2A1O14983 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
ATP2A1O14983 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.72■□□□□ 0.91
ATP2A1O14983 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2A1O14983 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP2A1O14983 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2A1O14983 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2A1O14983 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
ATP2A1O14983 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
ATP2A1O14983 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
ATP2A1O14983 FGFR3P6-201ENST00000457012 610 ntBASIC20.72■□□□□ 0.91
ATP2A1O14983 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 AC079776.4-201ENST00000511039 504 ntBASIC20.72■□□□□ 0.91
ATP2A1O14983 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.72■□□□□ 0.91
ATP2A1O14983 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
ATP2A1O14983 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP2A1O14983 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.72■□□□□ 0.91
ATP2A1O14983 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
ATP2A1O14983 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.72■□□□□ 0.91
ATP2A1O14983 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
ATP2A1O14983 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP2A1O14983 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.71■□□□□ 0.91
ATP2A1O14983 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 AC018712.1-201ENST00000455767 687 ntBASIC20.71■□□□□ 0.91
ATP2A1O14983 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 AC112698.1-201ENST00000510299 916 ntBASIC20.71■□□□□ 0.91
ATP2A1O14983 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.71■□□□□ 0.91
ATP2A1O14983 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.71■□□□□ 0.91
ATP2A1O14983 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
ATP2A1O14983 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.71■□□□□ 0.91
ATP2A1O14983 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.71■□□□□ 0.91
ATP2A1O14983 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.71■□□□□ 0.91
ATP2A1O14983 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
ATP2A1O14983 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms