Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.62■□□□□ 0.41
UBFD1O14562 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 AL355075.4-201ENST00000554988 638 ntBASIC17.62■□□□□ 0.41
UBFD1O14562 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.62■□□□□ 0.41
UBFD1O14562 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.62■□□□□ 0.41
UBFD1O14562 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.62■□□□□ 0.41
UBFD1O14562 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.62■□□□□ 0.41
UBFD1O14562 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.62■□□□□ 0.41
UBFD1O14562 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
UBFD1O14562 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.62■□□□□ 0.41
UBFD1O14562 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC17.62■□□□□ 0.41
UBFD1O14562 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
UBFD1O14562 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
UBFD1O14562 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.62■□□□□ 0.41
UBFD1O14562 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
UBFD1O14562 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.61■□□□□ 0.41
UBFD1O14562 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.61■□□□□ 0.41
UBFD1O14562 TSPY14P-201ENST00000303979 915 ntBASIC17.61■□□□□ 0.41
UBFD1O14562 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.61■□□□□ 0.41
UBFD1O14562 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
UBFD1O14562 SEC1P-202ENST00000473944 940 ntBASIC17.61■□□□□ 0.41
UBFD1O14562 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.61■□□□□ 0.41
UBFD1O14562 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 AC010653.2-201ENST00000623505 997 ntBASIC17.61■□□□□ 0.41
UBFD1O14562 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
UBFD1O14562 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.61■□□□□ 0.41
UBFD1O14562 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
UBFD1O14562 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
UBFD1O14562 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.6■□□□□ 0.41
UBFD1O14562 AL355312.1-201ENST00000407115 2176 ntBASIC17.6■□□□□ 0.41
UBFD1O14562 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.6■□□□□ 0.41
UBFD1O14562 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
UBFD1O14562 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
UBFD1O14562 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
UBFD1O14562 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.6■□□□□ 0.41
UBFD1O14562 TSPY15P-201ENST00000457163 923 ntBASIC17.6■□□□□ 0.41
UBFD1O14562 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 AC009065.1-201ENST00000564055 1225 ntBASIC17.6■□□□□ 0.41
UBFD1O14562 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.6■□□□□ 0.41
UBFD1O14562 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 KRT8P9-201ENST00000558927 1449 ntBASIC17.6■□□□□ 0.41
UBFD1O14562 CYP2D8P-201ENST00000433633 1490 ntBASIC17.6■□□□□ 0.41
UBFD1O14562 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.6■□□□□ 0.41
UBFD1O14562 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.6■□□□□ 0.41
UBFD1O14562 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
UBFD1O14562 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.6■□□□□ 0.41
UBFD1O14562 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
UBFD1O14562 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.59■□□□□ 0.41
UBFD1O14562 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
UBFD1O14562 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
UBFD1O14562 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms