Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN5O00501 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN5O00501 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN5O00501 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.12■□□□□ 0.65
CLDN5O00501 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.12■□□□□ 0.65
CLDN5O00501 DUSP5P1-201ENST00000441325 1139 ntBASIC19.12■□□□□ 0.65
CLDN5O00501 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.12■□□□□ 0.65
CLDN5O00501 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN5O00501 MIR3652-201ENST00000579335 131 ntBASIC19.12■□□□□ 0.65
CLDN5O00501 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
CLDN5O00501 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN5O00501 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC19.12■□□□□ 0.65
CLDN5O00501 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
CLDN5O00501 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
CLDN5O00501 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
CLDN5O00501 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.12■□□□□ 0.65
CLDN5O00501 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
CLDN5O00501 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN5O00501 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 AC093010.1-201ENST00000473625 1624 ntBASIC19.11■□□□□ 0.65
CLDN5O00501 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN5O00501 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLDN5O00501 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN5O00501 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
CLDN5O00501 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.11■□□□□ 0.65
CLDN5O00501 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.11■□□□□ 0.65
CLDN5O00501 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
CLDN5O00501 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN5O00501 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
CLDN5O00501 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN5O00501 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
CLDN5O00501 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.11■□□□□ 0.65
CLDN5O00501 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.11■□□□□ 0.65
CLDN5O00501 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.1■□□□□ 0.65
CLDN5O00501 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN5O00501 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC19.1■□□□□ 0.65
CLDN5O00501 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN5O00501 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN5O00501 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN5O00501 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN5O00501 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN5O00501 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.1■□□□□ 0.65
CLDN5O00501 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.1■□□□□ 0.65
CLDN5O00501 AC011840.4-201ENST00000578471 627 ntBASIC19.1■□□□□ 0.65
CLDN5O00501 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
CLDN5O00501 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 AC009154.2-201ENST00000621177 724 ntBASIC19.1■□□□□ 0.65
CLDN5O00501 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CLDN5O00501 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
CLDN5O00501 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CLDN5O00501 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CLDN5O00501 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.09■□□□□ 0.65
CLDN5O00501 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.09■□□□□ 0.65
CLDN5O00501 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms