Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.98■□□□□ 0.47
TLR4O00206 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 AF238378.1-201ENST00000526806 358 ntBASIC17.98■□□□□ 0.47
TLR4O00206 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.98■□□□□ 0.47
TLR4O00206 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC17.98■□□□□ 0.47
TLR4O00206 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.98■□□□□ 0.47
TLR4O00206 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
TLR4O00206 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.98■□□□□ 0.47
TLR4O00206 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
TLR4O00206 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.98■□□□□ 0.47
TLR4O00206 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TLR4O00206 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.98■□□□□ 0.47
TLR4O00206 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.98■□□□□ 0.47
TLR4O00206 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TLR4O00206 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.98■□□□□ 0.47
TLR4O00206 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
TLR4O00206 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.97■□□□□ 0.47
TLR4O00206 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.97■□□□□ 0.47
TLR4O00206 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR4O00206 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.97■□□□□ 0.47
TLR4O00206 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.97■□□□□ 0.47
TLR4O00206 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 MIR5100-201ENST00000579544 119 ntBASIC17.97■□□□□ 0.47
TLR4O00206 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 BNIP3P18-201ENST00000593976 575 ntBASIC17.97■□□□□ 0.47
TLR4O00206 AL591684.3-201ENST00000605187 298 ntBASIC17.97■□□□□ 0.47
TLR4O00206 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
TLR4O00206 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.97■□□□□ 0.47
TLR4O00206 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 AL049812.1-201ENST00000432563 2267 ntBASIC17.97■□□□□ 0.47
TLR4O00206 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR4O00206 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TLR4O00206 AC020763.4-201ENST00000623414 4170 ntBASIC17.97■□□□□ 0.47
TLR4O00206 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.97■□□□□ 0.47
TLR4O00206 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TLR4O00206 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TLR4O00206 TSPY12P-201ENST00000421279 868 ntBASIC17.96■□□□□ 0.47
TLR4O00206 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.96■□□□□ 0.47
TLR4O00206 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.96■□□□□ 0.47
TLR4O00206 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR4O00206 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.96■□□□□ 0.47
TLR4O00206 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.96■□□□□ 0.47
TLR4O00206 AC064862.7-201ENST00000604520 867 ntBASIC17.96■□□□□ 0.47
TLR4O00206 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TLR4O00206 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
TLR4O00206 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR4O00206 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TLR4O00206 NEFHP1-201ENST00000412845 2629 ntBASIC17.96■□□□□ 0.47
TLR4O00206 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.96■□□□□ 0.47
TLR4O00206 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TLR4O00206 HLA-A-201ENST00000376802 1334 ntBASIC17.96■□□□□ 0.46
TLR4O00206 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
TLR4O00206 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TLR4O00206 MYLKP1-201ENST00000509077 1580 ntBASIC17.96■□□□□ 0.46
TLR4O00206 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TLR4O00206 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms