Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 DRAXINP1-201ENST00000437611 948 ntBASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 TOB2P1-201ENST00000469761 992 ntBASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 KRT18P41-201ENST00000518924 1277 ntBASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 AL390719.2-201ENST00000606993 987 ntBASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.54■□□□□ 0.24
NPIPA3F8WFD2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 MYLKP1-201ENST00000509077 1580 ntBASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 AC090616.6-201ENST00000582640 721 ntBASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 GPR32P1-201ENST00000601788 811 ntBASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 AL020996.1-203ENST00000536896 2307 ntBASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 AC099343.3-201ENST00000605834 2503 ntBASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC16.53■□□□□ 0.24
NPIPA3F8WFD2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 RNF165-205ENST00000588679 2904 ntBASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 IGHGP-201ENST00000390555 1178 ntBASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 NUS1P1-201ENST00000446295 882 ntBASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 AC111152.3-201ENST00000569699 673 ntBASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 RN7SL510P-201ENST00000581311 263 ntBASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
NPIPA3F8WFD2 AC126763.1-201ENST00000552015 2118 ntBASIC16.52■□□□□ 0.23
NPIPA3F8WFD2 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.52■□□□□ 0.23
NPIPA3F8WFD2 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms