Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 CA15P1-201ENST00000481698 905 ntBASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 AC116562.2-201ENST00000507042 360 ntBASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 AC097488.1-201ENST00000507834 756 ntBASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 FAM197Y4-202ENST00000622692 608 ntBASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 LINC01126-201ENST00000623515 1646 ntBASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
TRIM49D1C9J1S8 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 AL359736.2-201ENST00000621992 437 ntBASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC18.21■□□□□ 0.51
TRIM49D1C9J1S8 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.5
TRIM49D1C9J1S8 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 HOXB1-202ENST00000577092 1414 ntBASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
TRIM49D1C9J1S8 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 PKD1P1-201ENST00000458669 6805 ntBASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TRIM49D1C9J1S8 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms