Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 AL355478.1-201ENST00000431686 821 ntTSL 5 BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 AC022558.1-201ENST00000560450 454 ntTSL 3 BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPDYE4A6NLX3 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPDYE4A6NLX3 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SPDYE4A6NLX3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SPDYE4A6NLX3 BCL2-203ENST00000589955 5011 ntBASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 ANKRD20A18P-201ENST00000359341 492 ntBASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 HSFY1P1-201ENST00000423928 1178 ntBASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 AC008040.2-201ENST00000461049 708 ntBASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 YBX1P2-201ENST00000489612 999 ntBASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 HMGB1P8-201ENST00000558211 949 ntBASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 AL031598.1-201ENST00000561511 1773 ntBASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SPDYE4A6NLX3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC096733.2-201ENST00000609937 1394 ntBASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC091390.4-202ENST00000476426 537 ntBASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 ETFRF1-207ENST00000556351 838 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC105148.1-201ENST00000604961 409 ntBASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SPDYE4A6NLX3 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 TSPY5P-201ENST00000426936 936 ntBASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 AC007663.1-201ENST00000438948 1240 ntBASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC20.49■□□□□ 0.87
SPDYE4A6NLX3 AL512604.3-201ENST00000569583 964 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms