Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 AC124067.4-201ENST00000519691 2379 ntBASIC15.54■□□□□ 0.08
TMEM235A6NFC5 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 FER1L4-210ENST00000615531 5998 ntBASIC15.54■□□□□ 0.08
TMEM235A6NFC5 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
TMEM235A6NFC5 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 KRT8P50-201ENST00000562022 1438 ntBASIC15.53■□□□□ 0.08
TMEM235A6NFC5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 MIR564-202ENST00000385049 94 ntBASIC15.53■□□□□ 0.08
TMEM235A6NFC5 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PPP1R14BP5-201ENST00000440334 435 ntBASIC15.53■□□□□ 0.08
TMEM235A6NFC5 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 AC011298.2-201ENST00000617989 482 ntBASIC15.53■□□□□ 0.08
TMEM235A6NFC5 ABBA01031674.1-201ENST00000635145 728 ntBASIC15.53■□□□□ 0.08
TMEM235A6NFC5 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 AC022211.2-201ENST00000585075 2527 ntBASIC15.53■□□□□ 0.08
TMEM235A6NFC5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
TMEM235A6NFC5 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 RPS2P4-201ENST00000476944 856 ntBASIC15.52■□□□□ 0.08
TMEM235A6NFC5 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 AC008622.2-201ENST00000617006 1229 ntBASIC15.52■□□□□ 0.08
TMEM235A6NFC5 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC15.52■□□□□ 0.08
TMEM235A6NFC5 AL023806.1-201ENST00000603994 1649 ntBASIC15.52■□□□□ 0.08
TMEM235A6NFC5 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.52■□□□□ 0.07
TMEM235A6NFC5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms