Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCDC66A2RUB6 AC134043.2-201ENST00000624206 2238 ntBASIC19.7■□□□□ 0.74
CCDC66A2RUB6 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 AC135776.1-201ENST00000319817 2481 ntBASIC19.69■□□□□ 0.74
CCDC66A2RUB6 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 AC004980.1-204ENST00000429707 299 ntBASIC19.69■□□□□ 0.74
CCDC66A2RUB6 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 AC110285.5-201ENST00000611501 352 ntBASIC19.69■□□□□ 0.74
CCDC66A2RUB6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
CCDC66A2RUB6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 MYC-208ENST00000641036 567 ntBASIC19.68■□□□□ 0.74
CCDC66A2RUB6 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
CCDC66A2RUB6 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 AL645608.8-201ENST00000606034 2086 ntBASIC19.67■□□□□ 0.74
CCDC66A2RUB6 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 NKILA-202ENST00000614771 2598 ntBASIC19.67■□□□□ 0.74
CCDC66A2RUB6 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 ESRRAP1-201ENST00000400596 1257 ntBASIC19.67■□□□□ 0.74
CCDC66A2RUB6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 AL353708.3-201ENST00000610272 989 ntBASIC19.67■□□□□ 0.74
CCDC66A2RUB6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CCDC66A2RUB6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms