Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
SYCE3A1L190 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.69■□□□□ 0.9
SYCE3A1L190 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SYCE3A1L190 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.69■□□□□ 0.9
SYCE3A1L190 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SYCE3A1L190 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.68■□□□□ 0.9
SYCE3A1L190 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.68■□□□□ 0.9
SYCE3A1L190 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC20.68■□□□□ 0.9
SYCE3A1L190 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 MIR564-202ENST00000385049 94 ntBASIC20.68■□□□□ 0.9
SYCE3A1L190 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SYCE3A1L190 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.68■□□□□ 0.9
SYCE3A1L190 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.68■□□□□ 0.9
SYCE3A1L190 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
SYCE3A1L190 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.68■□□□□ 0.9
SYCE3A1L190 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.68■□□□□ 0.9
SYCE3A1L190 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.68■□□□□ 0.9
SYCE3A1L190 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC20.68■□□□□ 0.9
SYCE3A1L190 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SYCE3A1L190 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.68■□□□□ 0.9
SYCE3A1L190 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SYCE3A1L190 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC20.67■□□□□ 0.9
SYCE3A1L190 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.67■□□□□ 0.9
SYCE3A1L190 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SYCE3A1L190 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC20.67■□□□□ 0.9
SYCE3A1L190 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
SYCE3A1L190 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.67■□□□□ 0.9
SYCE3A1L190 AL138781.1-201ENST00000566567 1274 ntBASIC20.67■□□□□ 0.9
SYCE3A1L190 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.67■□□□□ 0.9
SYCE3A1L190 AC008622.2-201ENST00000617006 1229 ntBASIC20.67■□□□□ 0.9
SYCE3A1L190 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.67■□□□□ 0.9
SYCE3A1L190 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.67■□□□□ 0.9
SYCE3A1L190 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SYCE3A1L190 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.67■□□□□ 0.9
SYCE3A1L190 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SYCE3A1L190 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.66■□□□□ 0.9
SYCE3A1L190 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
SYCE3A1L190 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC20.66■□□□□ 0.9
SYCE3A1L190 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.66■□□□□ 0.9
SYCE3A1L190 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.66■□□□□ 0.9
SYCE3A1L190 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.66■□□□□ 0.9
SYCE3A1L190 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
SYCE3A1L190 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.66■□□□□ 0.9
SYCE3A1L190 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC20.66■□□□□ 0.9
SYCE3A1L190 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SYCE3A1L190 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC20.66■□□□□ 0.9
SYCE3A1L190 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC20.66■□□□□ 0.9
SYCE3A1L190 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SYCE3A1L190 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms