Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC12.01□□□□□ -0.49
TRAV13-2A0A0B4J235 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 AL121906.2-201ENST00000621597 723 ntBASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 GMCL1P1-201ENST00000463439 1581 ntBASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
TRAV13-2A0A0B4J235 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RER1-204ENST00000378518 522 ntTSL 3 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 KRT8P32-201ENST00000512863 1461 ntBASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 AL138688.1-201ENST00000624851 1594 ntBASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
TRAV13-2A0A0B4J235 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms