Protein–RNA interactions for Protein: A0A0A0MS02

TRGV1, T-cell receptor gamma variable 1 (non-functional) (Fragment), humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV1A0A0A0MS02 KRT18P22-201ENST00000402024 1347 ntBASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 ILF2-202ENST00000368681 726 ntTSL 2 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 PKD1P5-201ENST00000532415 10291 ntBASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TRGV1A0A0A0MS02 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
TRGV1A0A0A0MS02 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 MIR149-201ENST00000384879 89 ntBASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 AC009947.2-201ENST00000444014 672 ntBASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 TMA16-209ENST00000513272 803 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 PXK-206ENST00000463280 2825 ntTSL 2 BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
TRGV1A0A0A0MS02 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRGV1A0A0A0MS02 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms