Protein–RNA interactions for Protein: A0A087WT03

TRAV26-1, T-cell receptor alpha variable 26-1 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV26-1A0A087WT03 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRAV26-1A0A087WT03 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 AL023284.2-201ENST00000405850 579 ntBASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 AC113347.1-201ENST00000413321 391 ntBASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 TCAF2P1-201ENST00000291129 2421 ntBASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRAV26-1A0A087WT03 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 AL138781.2-201ENST00000617896 1843 ntBASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRAV26-1A0A087WT03 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms