Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 AC009113.1-201ENST00000570267 2443 ntBASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCA3PQ9Y6N3 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
CLCA3PQ9Y6N3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLCA3PQ9Y6N3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.21■□□□□ 0.34
CLCA3PQ9Y6N3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 AC020916.1-201ENST00000587762 1774 ntBASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 MIR149-201ENST00000384879 89 ntBASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 LINC01311-201ENST00000565162 1445 ntBASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCA3PQ9Y6N3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 AC009102.3-201ENST00000623118 1491 ntBASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCA3PQ9Y6N3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLCA3PQ9Y6N3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms