Protein–RNA interactions for Protein: Q9Y6B7

AP4B1, AP-4 complex subunit beta-1, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4B1Q9Y6B7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 AC026271.3-201ENST00000571884 352 ntBASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 AC026471.5-201ENST00000615068 467 ntBASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 AC093677.2-201ENST00000600169 1863 ntBASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
AP4B1Q9Y6B7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 NUDT16P1-203ENST00000513809 620 ntBASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
AP4B1Q9Y6B7 AL499627.1-201ENST00000569373 2188 ntBASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AC046158.3-201ENST00000624947 2558 ntBASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AC008894.3-201ENST00000624324 3103 ntBASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AC004980.1-204ENST00000429707 299 ntBASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.47■□□□□ 0.39
AP4B1Q9Y6B7 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4B1Q9Y6B7 PKD1P1-201ENST00000458669 6805 ntBASIC17.46■□□□□ 0.39
AP4B1Q9Y6B7 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
AP4B1Q9Y6B7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
AP4B1Q9Y6B7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.46■□□□□ 0.39
AP4B1Q9Y6B7 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms