Protein–RNA interactions for Protein: Q9Y663

HS3ST3A1, Heparan sulfate glucosamine 3-O-sulfotransferase 3A1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HS3ST3A1Q9Y663 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 KRT18P67-201ENST00000432816 1264 ntBASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 AC079776.4-201ENST00000511039 504 ntBASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 MTDHP3-201ENST00000594186 672 ntBASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 AL773604.1-201ENST00000617417 272 ntBASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HS3ST3A1Q9Y663 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 AC126763.1-201ENST00000552015 2118 ntBASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 AF186996.4-201ENST00000467186 377 ntBASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 AP001005.1-201ENST00000571755 1248 ntBASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HS3ST3A1Q9Y663 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 AC132938.6-201ENST00000623828 1655 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 AP005117.1-201ENST00000584346 1413 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 AP000347.1-202ENST00000435868 847 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 ABCD1P5-201ENST00000445663 754 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 FGFR3P6-201ENST00000457012 610 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 SCARNA2-201ENST00000458748 420 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 RNA5SP419-201ENST00000515908 135 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 BX640515.1-201ENST00000617215 977 ntBASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HS3ST3A1Q9Y663 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.73■□□□□ 0.43
HS3ST3A1Q9Y663 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms