Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.35■□□□□ 0.53
PCDHGC4Q9Y5F7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 GPR32P1-201ENST00000601788 811 ntBASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHGC4Q9Y5F7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHGC4Q9Y5F7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 TSPY22P-201ENST00000427496 604 ntBASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 AC113404.2-201ENST00000507884 177 ntBASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 REXO1L9P-201ENST00000604264 2108 ntBASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 AL390719.2-201ENST00000606993 987 ntBASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHGC4Q9Y5F7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PCDHGC4Q9Y5F7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 AC135050.7-201ENST00000624508 2218 ntBASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 AL353692.3-201ENST00000407031 1396 ntBASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PCDHGC4Q9Y5F7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms