Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AL845331.1-201ENST00000424978 1190 ntBASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AC135776.1-201ENST00000319817 2481 ntBASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.18■□□□□ 0.5
PCDHB1Q9Y5F3 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 AC024243.1-201ENST00000609234 778 ntBASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PCDHB1Q9Y5F3 ESPNP-201ENST00000270691 2015 ntBASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 TSSC2-201ENST00000450217 709 ntBASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PCDHB1Q9Y5F3 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PCDHB1Q9Y5F3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms