Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 GNAS-203ENST00000306120 1878 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 AC135776.1-201ENST00000319817 2481 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.15■□□□□ 0.34
RNF6Q9Y252 AL499627.1-201ENST00000569373 2188 ntBASIC17.15■□□□□ 0.34
RNF6Q9Y252 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RNF6Q9Y252 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.34
RNF6Q9Y252 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
RNF6Q9Y252 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 AC092338.2-201ENST00000568827 1415 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 AC106820.2-201ENST00000563775 3264 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 UPK3BP1-201ENST00000428678 509 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 COX11P1-201ENST00000489116 835 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 AL160286.2-201ENST00000567150 934 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 AC091076.1-201ENST00000610741 619 ntBASIC17.14■□□□□ 0.33
RNF6Q9Y252 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RNF6Q9Y252 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
RNF6Q9Y252 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 TSPY5P-201ENST00000426936 936 ntBASIC17.13■□□□□ 0.33
RNF6Q9Y252 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 TSPY17P-201ENST00000450329 467 ntBASIC17.13■□□□□ 0.33
RNF6Q9Y252 AC092647.4-201ENST00000457211 535 ntBASIC17.13■□□□□ 0.33
RNF6Q9Y252 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 AC141257.4-201ENST00000634557 245 ntBASIC17.13■□□□□ 0.33
RNF6Q9Y252 AC136944.6-201ENST00000634818 245 ntBASIC17.13■□□□□ 0.33
RNF6Q9Y252 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RNF6Q9Y252 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.13■□□□□ 0.33
RNF6Q9Y252 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RNF6Q9Y252 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms