Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.02■□□□□ 0.15
COMMD3Q9UBI1 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 GMCL1P1-201ENST00000463439 1581 ntBASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 PHGDH-209ENST00000641074 1780 ntBASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 CICP6-201ENST00000457191 2729 ntBASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
COMMD3Q9UBI1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 NME6-213ENST00000451657 871 ntTSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC16■□□□□ 0.15
COMMD3Q9UBI1 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
COMMD3Q9UBI1 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 PCDH8P1-201ENST00000428983 2773 ntBASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC15.99■□□□□ 0.15
COMMD3Q9UBI1 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms