Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 AC106795.1-205ENST00000512851 1056 ntBASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 SLC25A6P4-201ENST00000586535 553 ntBASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 AC114341.1-201ENST00000618070 349 ntBASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRIT1Q9P2V4 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 MRPL3P1-201ENST00000400109 1033 ntBASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 AC005336.2-201ENST00000593183 939 ntBASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LRIT1Q9P2V4 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 AP000347.1-202ENST00000435868 847 ntBASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
LRIT1Q9P2V4 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT1Q9P2V4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT1Q9P2V4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT1Q9P2V4 TNXA-203ENST00000507684 2038 ntBASIC17.52■□□□□ 0.39
LRIT1Q9P2V4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LRIT1Q9P2V4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms