Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
ABCF3Q9NUQ8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 PP12613-201ENST00000424958 2230 ntBASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ABCF3Q9NUQ8 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
ABCF3Q9NUQ8 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 AC022211.2-201ENST00000585075 2527 ntBASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 TSPY23P-201ENST00000440136 739 ntBASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 FAM207BP-201ENST00000447172 505 ntBASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 AC008040.2-201ENST00000461049 708 ntBASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 B3GAT3P1-201ENST00000471720 806 ntBASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 NUDT16P1-203ENST00000513809 620 ntBASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
ABCF3Q9NUQ8 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 AP003071.4-201ENST00000562276 1284 ntBASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 SLC25A1P4-201ENST00000567977 778 ntBASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ABCF3Q9NUQ8 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ABCF3Q9NUQ8 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms