Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIR1238-201ENST00000408483 83 ntBASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 AL109659.2-201ENST00000606809 1674 ntBASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LIN7CQ9NUP9 PKD1P5-201ENST00000532415 10291 ntBASIC15.14■□□□□ 0.02
LIN7CQ9NUP9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 C2orf69P3-201ENST00000565542 1120 ntBASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 AC073912.3-201ENST00000624414 853 ntBASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.14■□□□□ 0.01
LIN7CQ9NUP9 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 LINC00896-202ENST00000609602 2128 ntBASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 CROCCP1-201ENST00000426910 5675 ntBASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 CA15P1-201ENST00000481698 905 ntBASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LIN7CQ9NUP9 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
LIN7CQ9NUP9 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms