Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 AC093010.1-201ENST00000473625 1624 ntBASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CDC42SE2Q9NRR3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 KRT8P7-201ENST00000533003 1432 ntBASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 AL135905.2-201ENST00000584934 1404 ntBASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 FAM197Y1-201ENST00000421178 764 ntBASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SAPCD2P4-201ENST00000424595 1171 ntBASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SRI-203ENST00000419179 1307 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 HOXB1-202ENST00000577092 1414 ntBASIC12.54□□□□□ -0.4
CDC42SE2Q9NRR3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 AC116562.2-201ENST00000507042 360 ntBASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 NAT14-202ENST00000587400 416 ntTSL 5 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 CD177P1-201ENST00000606252 935 ntBASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CDC42SE2Q9NRR3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms