Protein–RNA interactions for Protein: Q9NR64

KLHL1, Kelch-like protein 1, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL1Q9NR64 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 AC069148.1-201ENST00000608741 768 ntBASIC17.14■□□□□ 0.33
KLHL1Q9NR64 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.14■□□□□ 0.33
KLHL1Q9NR64 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AL512353.2-201ENST00000448759 1962 ntBASIC17.13■□□□□ 0.33
KLHL1Q9NR64 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AC112497.1-201ENST00000624824 639 ntBASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 AC008556.1-201ENST00000610908 2040 ntBASIC17.13■□□□□ 0.33
KLHL1Q9NR64 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
KLHL1Q9NR64 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 AL031598.1-201ENST00000561511 1773 ntBASIC17.12■□□□□ 0.33
KLHL1Q9NR64 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
KLHL1Q9NR64 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
KLHL1Q9NR64 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms