Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 SART3-203ENST00000546611 1184 ntBASIC21.38■■□□□ 1.01
DDX4Q9NQI0 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC21.38■■□□□ 1.01
DDX4Q9NQI0 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 MIR574-201ENST00000385209 96 ntBASIC21.37■■□□□ 1.01
DDX4Q9NQI0 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.37■■□□□ 1.01
DDX4Q9NQI0 ABCD1P5-201ENST00000445663 754 ntBASIC21.37■■□□□ 1.01
DDX4Q9NQI0 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
DDX4Q9NQI0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 AC021087.4-201ENST00000563761 564 ntBASIC21.36■■□□□ 1.01
DDX4Q9NQI0 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC21.36■■□□□ 1.01
DDX4Q9NQI0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 PHGDH-209ENST00000641074 1780 ntBASIC21.35■■□□□ 1.01
DDX4Q9NQI0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC21.35■■□□□ 1.01
DDX4Q9NQI0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX4Q9NQI0 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
DDX4Q9NQI0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC21.34■■□□□ 1.01
DDX4Q9NQI0 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
DDX4Q9NQI0 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC21.34■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms